CDS
| Accession Number | TCMCG066C18172 |
| gbkey | CDS |
| Protein Id | XP_034594472.1 |
| Location | complement(join(5219622..5219721,5219816..5219974,5220071..5220324,5220944..5220967,5221248..5221387,5221639..5221750,5222237..5222308,5222399..5222492,5222692..5222843,5222953..5223021)) |
| Gene | LOC117856147 |
| GeneID | 117856147 |
| Organism | Setaria viridis |
Protein
| Length | 391aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034738581.1 |
| Definition | vacuolar protein sorting-associated protein 60.1-like [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | Belongs to the SNF7 family |
| KEGG_TC | - |
| KEGG_Module |
M00412
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12198
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04144
[VIEW IN KEGG] ko04217 [VIEW IN KEGG] map04144 [VIEW IN KEGG] map04217 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005768 [VIEW IN EMBL-EBI] GO:0005770 [VIEW IN EMBL-EBI] GO:0005771 [VIEW IN EMBL-EBI] GO:0012505 [VIEW IN EMBL-EBI] GO:0031410 [VIEW IN EMBL-EBI] GO:0031982 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0097708 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAAGAAGATCTTCGGCGCTAAAAAGGACAAGGGGCCGCCGCCCTCCATCCAGGACGCCACCGAGCGAATAAACAAGCGGGGCGAGACGGTGGACGAGAAGATCAAGAAGCTGGACGAGGAGCTGGCAAGGTACAAGGAGCAGATCCGCAAGACCCGCCCCGGCCCGTCCCAGGAGGCCATCAAGGCGCGCGCCATCCGACTCCTCAAGCACAAGCGCATGTATGAGGAGCAACGCAACATGCTGTACAACCAAACCTACAATCTAGACCAAGTTGCCTTTGCTGCTGATGGCCTCAAGGACGCTCAGCAGACTATGAATGCTATGAAGGCAGCGAACAAGGAGCTCAAGGGAATGATGAAAACCGTCAAGATTGAGGACATTGATAATATGCAAGATGAAATGACGGATCTGATGGATGTGAGCAATGAGATACAAGAAACTCTTGGTAGAAGCTATAACATACCTGATGATGTTGATGAGGAAGAACTGATGGGGGAGCTGGATGCTTTGGAGTCTGATATGGAGTTTGAGTCAGCTGCAGTCCCATCATATCTTCAGCCAGAAACTGATTTTGATGCTGATCTCAATTTACCTGCCGCACCAACACGTCCTGCAGCAGTCCCAGCAGGGGGGCAGGAGGATGAACTAGGATTGCCAGCGATAAGTCTTCCAGATCATACTGAACCAAGCTGCCACTTCACTGCAACACTTGATCAACACAAGGAAAGTTCAGATCAGAAGATGCAGGCCGCCGCTACAGCCGTCAGGTTCTCAGCCGTGGCGCCCGTGAAGGGCAGGCCGGCGGTGAGGAGCGTGGCGGCGGTTCGCATTGTCCTCCGGAGGAGCTTCCGTGCCGCCGCAGTCGCCGTCTCCGCGGCCGAACCTGCCGAGGTCGACTACAGCTCGAGCTCCTCGGTGTTCCCCATGGAAGCCTGCGAGCTGTTCGGCGGCGACGCCTGCAGCGGGCAGATGTACCCGGAGGCTAGGCTCGCCGCCTCTGCGGCGGCGGACGCCGCGACCAGGAGGCAGGAGGAGGTGGAGAGGGACTACGTGTCCTACGACGAGCCCAAAACGGTGTTCCCCGGCGAGGCGTGCGACGACCTCGGCGGCGAGTTCTGCGAGGAGCCGTACCAGGCCGGCGTCTCCAGGGATTTGGCGCACCCTGAAGCCTGA |
| Protein: MKKIFGAKKDKGPPPSIQDATERINKRGETVDEKIKKLDEELARYKEQIRKTRPGPSQEAIKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELKGMMKTVKIEDIDNMQDEMTDLMDVSNEIQETLGRSYNIPDDVDEEELMGELDALESDMEFESAAVPSYLQPETDFDADLNLPAAPTRPAAVPAGGQEDELGLPAISLPDHTEPSCHFTATLDQHKESSDQKMQAAATAVRFSAVAPVKGRPAVRSVAAVRIVLRRSFRAAAVAVSAAEPAEVDYSSSSSVFPMEACELFGGDACSGQMYPEARLAASAAADAATRRQEEVERDYVSYDEPKTVFPGEACDDLGGEFCEEPYQAGVSRDLAHPEA |